ROS-associated gene clusters dominate suborbital DEG profile
Claim that a large portion of the differentially expressed genes in suborbital flight are ROS related, primarily from core DEGs of ROS Wheel Cluster III, which are indicative of rapid stress response.
Evidence Quote
“A large portion of the differentially expressed genes in suborbital flight are ROS related (Fig. 4), primarily those represented in core DEGs of ROS Wheel Cluster III.”
Relationship
Arguments
Connections (5)
Evidence
“Citation to BMC Plant Biology 2013 paper on organ-specific Arabidopsis transcriptome remodeling in response to spaceflight.”
“Citation to Npj Microgravity 2023 meta-analysis of Arabidopsis plant transcriptome response to space flight and microgravity.”
“Citation to Plant Physiology 2016 paper on refining ROS transcriptional footprints.”
“Citation to Am. J. Bot. 2015 on Arabidopsis spaceflight transcriptome and peroxidase/cell wall/root hair genes”
“Citation to Am. J. Bot. 2019 paper on ecotypic transcriptomic variation and oxidative stress signatures in Arabidopsis spaceflight responses”
“Citation to Front. Plant Sci. 2020 on environment for exploring Arabidopsis spaceflight transcriptome datasets”
“Citation to Int. J. Mol. Sci. 2019 on HSFA2 gene function in adaptation of plant cells to spaceflight”
“Citation to Singh et al. 2022 Int. J. Mol. Sci. update on reactive oxygen species strategies to stave off environmental stresses in plants under climate change.”
“Citation to Sugimoto et al. 2014 BMC Plant Biol. on genome-wide expression analysis of the reactive oxygen species gene network in Mizuna plants grown in long-term spaceflight.”
“Genome-wide expression analysis of ROS gene network in Mizuna plants after long-term spaceflight, Sugimoto et al. (2014)”
“Correll et al. (2013) explore how Arabidopsis seedling transcriptomes respond to gravity and spaceflight.”