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Association·arcadia

Pipeline combines sequence, structure, and function

The actin identification pipeline determines whether a candidate protein is a true actin by combining sequence conservation, structural conservation, and functional conservation criteria.

Confidence
90%
active

Evidence Quote

“This pipeline considers sequence and structural identity together as well as important functional properties and their conservation to identify true actins.”

Arguments

Sequence conservationsubject
Structural conservationobject

Connections (4)

Functional conservationFactor
Actin identification pipelineFactor
Reasoning for defining "true" actins versus ARPs/ALPsInferenceChain
Microchamber components enable microscopyAssociation

Evidence

“Seqera's blog, featuring an example implementation, cited as supporting evidence for workflow management capabilities.”

Main Paper

“Citation of the seqqc pipeline as an example Nextflow implementation supporting workflow reproducibility.”

Main Paper

“Reference to Avasthi et al. 2025 "The notebook pub" cited as evidence for reproducibility principles.”

Main Paper