Factor·arcadia
Horizontal gene transfer (HGT)
Exchange of DNA between species, enabling acquisition of novel gene functions and driving adaptation.
Confidence
100%
active
Source
Adair L. Borges et al. (2023). PreHGT: A scalable workflow that screens for horizontal gene transfer within and between kingdoms doi:10.57844/arcadia-jfbp-7p11 ↗
Connections (15)
Compositional scan identifies HGT candidatesAssociation
BLASTp-based screening identifies HGT candidatesAssociation
Parametric methods identify candidate HGT eventsAssociation
Phylogenetic methods identify candidate HGT eventsAssociation
BLAST-based HGT indices identify candidatesAssociation
Genome contamination yields HGT false positivesAssociation
Pseudo-pangenome reduces runtime in HGT screeningAssociation
Contamination assessment reduces HGT false positivesAssociation
Interpolated motif method identifies HGTAssociation
Alienness method identifies HGT candidatesAssociation
Comparative genomics identifies alien genesAssociation
AvP software detects candidate HGTsAssociation
DarkHorse method predicts HGT eventsAssociation
GeneMates detects HGT gene co-transferAssociation
HGT from bacteria/plants to AMF occursAssociation