BLAST-based HGT indices identify candidates
Algorithms such as Alien index, HGT score, and Donor distribution index applied to BLAST results predict HGT candidates.
Evidence Quote
“BLAST-based HGT indices identify candidate horizontally transferred genes”
Relationship
Evidence
“Evidence line summarizing that the Alienness software enables rapid detection of candidate horizontal gene transfers across the tree of life, as reported by Rancurel et al. (2017).”
“Evidence line summarizing that the DarkHorse method predicts horizontal gene transfer genome-wide, as described by Podell and Gaasterland (2007).”
“Evidence line summarizing that the GeneMates R package detects horizontal gene co-transfer between bacteria using association analysis controlled for population structure, as described by Wan et al. (2020).”
“Evidence summarizing that HGTector is an automated method facilitating genome-wide discovery of putative horizontal gene transfers.”