Association·arcadia

strain resolution tools enable study of microdiversity

Claim that tools like STRONG and inStrain enable resolving strains and population microdiversity in metagenomic data.

Confidence
80%
active

Evidence Quote

Software like STRONG and inStrain enable strain and microdiversity resolution in metagenomes

Relationship

strain resolution tools enables microdiversity in microbiomes

Evidence

Reference for the STRONG software for metagenomics strain resolution.

Quince C et al. (2021). STRONG: metagenomics strain resolution on assembly graphs doi:10.1186/s13059-021-02419-7

Reference for inStrain, a tool for population microdiversity and shared strain detection in metagenomes.

Olm MR et al. (2021). inStrain profiles population microdiversity from metagenomic data and sensitively detects shared microbial strains doi:10.1038/s41587-020-00797-0

Reference for strain interpretation in microbiomes.

(2020). Diversity within species: interpreting strains in microbiomes doi:10.1038/s41579-020-0368-1