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sourmash gather algorithm

A greedy, best-match-first algorithm in sourmash that matches query signatures to a minimum set of reference genomes covering all k-mers in the query.

Confidence
80%
active

Source

Adair L. Borges et al. (2023). How can sourmash outputs be analyzed in R? doi:10.57844/arcadia-1896-ke33 ↗

Connections (1)

sourmash gather provides taxonomic profiles for metagenomesAssociation