Phylogenetic data analysis methods support findings on taxonomic bias | ARCADIA FyloGraph | FyloGraph

InferenceChain·arcadia

Phylogenetic data analysis methods support findings on taxonomic bias

The use of various phylogenetic analysis packages and taxonomy databases justify the reasoning about phylogenetic biases in protein structure databases.

Confidence

90%

◑partialactivecomplexity: mid

Reasoning Steps (5)

NCBI Taxonomy update informs database curationStep 1

ape 5.0 as environment for phylogenetic analysesStep 2

Picante integrates phylogenies and ecology dataStep 3

phytools 2.0 for phylogenetic comparative methodsStep 4

caper package for comparative phylogenetic analysesStep 5

Source

Synthesis for current paper