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k-mers

Substrings of length k extracted from DNA or protein sequences, used for sequence comparison and representation in bioinformatics analyses.

Confidence
80%
active

Source

Adair L. Borges et al. (2023). How can sourmash outputs be analyzed in R? doi:10.57844/arcadia-1896-ke33 ↗

Connections (3)

FracMinHash sketch represents k-mersAssociation
Upset plots visualize intersections of k-mers across samplesAssociation
Protein k-mers enable assembly-free metapangenomicsAssociation