Inference pipeline for gene family evolution across tree of life — ARCADIA Knowledge Graph

InferenceChain·arcadia

Inference pipeline for gene family evolution across tree of life

The NovelTree workflow integrates proteome data and phylogenetic methods in a parallelized framework to infer gene families, gene family trees, species trees, and gene family evolutionary dynamics at large evolutionary scales.

Confidence
90%
◑partialactivecomplexity: mid

Reasoning Steps (3)

Parallelized execution reduces compute timeStep 1
Flexible modular design supports diverse analysesStep 2
Explicit modeling of gene duplication, transfer, and lossStep 3

Source

Celebi et al. (2025). NovelTree: Highly parallelized phylogenomic inference doi:10.57844/arcadia-z08x-v798 ↗