InferenceChain·arcadia

Inference methods for species tree reconstruction

This chain explains the various computational approaches and tools used for reconstructing species trees from gene family trees, focusing on methods that address missing data and gene duplication events.

Confidence
85%
◑partialactivecomplexity: mid

Reasoning Steps (3)

Asteroid method handles missing dataStep 1
DISCO uses multicopy gene family decompositionStep 2
GeneRax integrates gene duplication, transfer, and lossStep 3

Source

Synthesis for current paper