Association·arcadia
Challenges limit usability of single-cell sequencing data
Claim that challenges in data size, format standardization, and software documentation limit the usability of single-cell RNA sequencing data.
Confidence
90%
active
Evidence Quote
“Many papers argue that the utility of their work comes from generating data resources for the broader scientific community. Yet these same studies often provide few practical ways to access and analyze their data.”
Relationship
Data acquisition and sanitization limits data accessibility
Arguments
Connections (6)
Genome contamination yields HGT false positivesAssociation
Single-cell sequencing data sizeFactor
Analytical and accessibility challenges limit scRNA-seq data usabilityInferenceChain
Reasoning on cross-species single-cell RNA-seq integrationInferenceChain
Explaining cross-species cell landscape integration challengesInferenceChain
Inference on protein structure and sequence relationshipsInferenceChain
Evidence
“Evidence line informing recommendations for data formatted shares and improved documentation to make single-cell RNA sequencing data more usable.”
Computational infrastructure and challenges in single-cell RNA sequencing data