Association·arcadia
A. amoebiformis uses extensions for motility
Claim that Amorphochlora amoebiformis depends on its thin, protruding extensions to perform motility, including crawling along surfaces.
Confidence
80%
active
Evidence Quote
“A. amoebiformis uses thin extensions for cell motility”
Relationship
Amorphochlora amoebiformis enables Cellular motility
Connections (2)
Evidence
“All code is available in this Github repository (DOI: 10.5281/zenodo.7015909), including Fiji macros, Cellprofiler project files, and R analysis files.”
Main Paper
“Reference to MAFFT algorithm for multiple sequence alignment”
Katoh, K. (2002). Katoh K. (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform doi:10.1093/nar/gkf436 ↗
“Reference to MAFFT v7 multiple sequence alignment software”
Katoh, K. & Standley, D.M. (2013). Katoh K, Standley DM. (2013) MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability doi:10.1093/molbev/mst010 ↗
“Reference to Pfam protein families database”
Mistry, J. et al. (2020). Mistry J et al. (2020) Pfam: The protein families database in 2021 doi:10.1093/nar/gkaa913 ↗
“Reference to Foldseek protein structure search algorithm”
van Kempen, M. et al. (2022). van Kempen M et al. (2022) Fast and accurate protein structure search with Foldseek doi:10.1101/2022.02.07.479398 ↗
“Reference to unconventional actin providing F-actin function in Chlamydomonas”
Onishi, M. et al. (2015). Onishi M, Pringle JR, Cross FR. (2015) Evidence That an Unconventional Actin Can Provide Essential F-Actin Function and That a Surveillance System Monitors F-Actin Integrity in Chlamydomonas doi:10.1534/genetics.115.184663 ↗